MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
8_33DSS_C5_S8
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 484
bases: 5,219,070 bps
CDS: 4,488
rRNA: 11
tRNA: 69
tmRNA: 1
Total number of protein coding genes annotated/found:
4,263
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5047|JADGLP010000129.1
MBF0834548.1
Genome Viewer
NA
AA
605/201
605-1
hypothetical protein
SEQF5047|JADGLP010000129.1
MBF0834549.1
Genome Viewer
NA
AA
147/49
1049-903
hypothetical protein
SEQF5047|JADGLP010000129.1
MBF0834550.1
Genome Viewer
NA
AA
864/288
1876-2739
hypothetical protein
SEQF5047|JADGLP010000129.1
MBF0834551.1
Genome Viewer
NA
AA
1008/336
3736-2729
metallophosphoesterase
SEQF5047|JADGLP010000129.1
MBF0834552.1
Genome Viewer
NA
AA
483/161
4237-3755
2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase
SEQF5047|JADGLP010000129.1
MBF0834553.1
Genome Viewer
NA
AA
615/205
4917-4303
fumarylacetoacetate hydrolase family protein
SEQF5047|JADGLP010000129.1
MBF0834554.1
Genome Viewer
NA
AA
651/217
5567-4917
redox-sensing transcriptional repressor Rex
SEQF5047|JADGLP010000129.1
MBF0834555.1
Genome Viewer
NA
AA
351/117
5743-6093
translation initiation factor
SEQF5047|JADGLP010000129.1
MBF0834556.1
Genome Viewer
NA
AA
993/331
7156-6164
elongation factor Ts
SEQF5047|JADGLP010000129.1
MBF0834557.1
Genome Viewer
NA
AA
837/279
8115-7279
30S ribosomal protein S2
SEQF5047|JADGLP010000129.1
MBF0834558.1
Genome Viewer
NA
AA
387/129
8624-8238
30S ribosomal protein S9
SEQF5047|JADGLP010000129.1
MBF0834559.1
Genome Viewer
NA
AA
462/154
9092-8631
50S ribosomal protein L13
SEQF5047|JADGLP010000129.1
MBF0834560.1
Genome Viewer
NA
AA
1401/467
9592-10992
alpha-L-fucosidase
SEQF5047|JADGLP010000129.1
MBF0834561.1
Genome Viewer
NA
AA
3180/1060
11232-14411
TonB-dependent receptor
SEQF5047|JADGLP010000129.1
MBF0834562.1
Genome Viewer
NA
AA
1716/572
14434-16149
RagB/SusD family nutrient uptake outer membrane protein
SEQF5047|JADGLP010000129.1
MBF0834563.1
Genome Viewer
NA
AA
2607/869
16157-18763
DUF4962 domain-containing protein
SEQF5047|JADGLP010000129.1
MBF0834564.1
Genome Viewer
NA
AA
711/237
18781-19491
DUF3575 domain-containing protein
SEQF5047|JADGLP010000129.1
MBF0834565.1
Genome Viewer
NA
AA
1056/352
19504-20559
hypothetical protein
SEQF5047|JADGLP010000129.1
MBF0834566.1
Genome Viewer
NA
AA
1677/559
20605-22281
hypothetical protein
SEQF5047|JADGLP010000129.1
MBF0834567.1
Genome Viewer
NA
AA
2541/847
22402-24942
DUF4962 domain-containing protein
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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